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1. WO2008048269 - MICROARRAY FOR PATHOGEN IDENTIFICATION

Publication Number WO/2008/048269
Publication Date 24.04.2008
International Application No. PCT/US2006/041246
International Filing Date 20.10.2006
IPC
C12Q 1/68 2006.1
CCHEMISTRY; METALLURGY
12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
1Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
68involving nucleic acids
CPC
C12Q 1/6837
CCHEMISTRY; METALLURGY
12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS
1Measuring or testing processes involving enzymes, nucleic acids or microorganisms
68involving nucleic acids
6813Hybridisation assays
6834Enzymatic or biochemical coupling of nucleic acids to a solid phase
6837using probe arrays or probe chips
C12Q 1/689
CCHEMISTRY; METALLURGY
12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS
1Measuring or testing processes involving enzymes, nucleic acids or microorganisms
68involving nucleic acids
6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
6888for detection or identification of organisms
689for bacteria
C12Q 1/705
CCHEMISTRY; METALLURGY
12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS
1Measuring or testing processes involving enzymes, nucleic acids or microorganisms
70involving virus or bacteriophage
701Specific hybridization probes
705for herpetoviridae, e.g. herpes simplex, varicella zoster
Applicants
  • COMBIMATRIX CORPORATION [US]/[US] (AllExceptUS)
  • LODES, Michael, J. [US]/[US] (UsOnly)
  • SUCIU, Dominic [US]/[US] (UsOnly)
Inventors
  • LODES, Michael, J.
  • SUCIU, Dominic
Agents
  • VRBANAC, Michael, D.
Priority Data
11/584,37920.10.2006US
60/728,64120.10.2005US
Publication Language English (en)
Filing Language English (EN)
Designated States
Title
(EN) MICROARRAY FOR PATHOGEN IDENTIFICATION
(FR) MICRORÉSEAU POUR IDENTIFICATION D'AGENTS PATHOGÈNES
Abstract
(EN) There is disclosed a microarray device for pathogen identification and for subtyping influenza A. Pools of primers are disclosed and used to amplify any subtype of influenza A. Pathogen identification includes influenza A, influenza B, parainfluenza virus, adenovirus, enterovirus, rhinovirus, human metapneumovirus, respiratory syncytal virus, herpes simplex viruses, SARS coronavirus, Epstein-Barr virus, human herpes virus, pan bacteria, Chlamydia, Mycoplasma, streptococcus, Bacillus anthracis, Streptococcuspyogenes, Mycoplasmapneumoniae, Chlamydiapneumoniae, Bacillus thuringiensis, Bacillus subtilis, Bacillus cereus, and B. anthracis. The probes are preferably selected from the first 500 nt of a gene from the 5' end. The primers are preferably selected from bases in the 500 to 600 nt range from the 5' end.
(FR) La présente invention concerne un dispositif de microréseau permettant l'identification d'agents pathogènes et le sous-typage de la grippe A. L'invention concerne des ensembles d'amorces qui sont utilisés pour amplifier n'importe quel sous-type de grippe A. La détermination d'agents pathogènes inclut l'identification de la grippe A, la grippe B, le virus parainfluenza, l'adénovirus, l'entérovirus, le rhinovirus, le métapneumovirus humain, le virus respiratoire syncytial, les virus de l'herpès, le coronavirus du syndrome respiratoire aigu sévère, le virus Epstein-Barr, le virus de l'herpès humain, les bactéries PAN, les bactéries du genre Chlamydia, Mycoplasma, streptococcus, Bacillus anthracis, Streptococcus pyogenes, Mycoplasma pneumoniae, Chlamydia pneumoniae, Bacillus thuringiensis, Bacillus subtilis, Bacillus cereus, et B. anthracis. Les sondes sont de préférence choisies parmi les 500 premiers nucléotides de l'extrémité 5'. Les amorces sont de préférence choisies parmi les bases constituant les 500 à 600 nucléotides de l'extrémité 5'.
Related patent documents
EP6851729This application is not viewable in PATENTSCOPE because the national phase entry has not been published yet or the national entry is issued from a country that does not share data with WIPO or there is a formatting issue or an unavailability of the application.
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